balanced.cv.folds | Create balanced folds for cross validation |
balanced.train.and.test | Get a balanced test and train dataset |
base.dir | change base.dir for run.cache |
build.function.digest | Build digest of function from the actual code |
cache.compression | change cache.compression for run.cache |
calculate.result | Calculate/load result and save if necessary |
coding.genes | Retrive coding genes from known databases |
coding.genes.ensembl | Ensembl coding genes, local function |
create.directory.for.cache | Create directories for cache |
curl.workaround | Workaround for bug with curl when fetching specific ensembl mirror |
digest.cache | Default digest method |
draw.cov.matrix | Plot covariance heatmap from matrix |
gen.synth.xdata | Generate xdata matrix with pre-determined covariance |
loose.rock | loose.rock: compilation of data science functions |
loose.rock.options | Constants for 'loose.rock' package |
multiplot | Multiple plot |
my.colors | Custom pallete of colors |
my.symbols | Custom pallete of symbols in plots |
proper | Capitalizes all words in string |
run.cache | Run function and save cache |
run.cache-method | Run function and save cache |
save.run.cache | Saving the cache |
show.message | Show messages option in run.cache |
tempdir.cache | Temporary directory for runCache |