Dataset with targeted and non-targeted anticancer drugs


[Up] [Top]

Documentation for package ‘oncoPharmaDB’ version 0.4.7

Help Pages

chembl_compound_moa Function that accepts a ChEMBL molecule identifer and uses the ChEMBL web service API to return its mechanism of action (including disease efficacy, trial phase etc)
chembl_compound_properties Function that accepts a ChEMBL molecule identifer and uses the ChEMBL web service API to return a range of compound properties
chembl_compound_salts Function that accepts a ChEMBL molecule identifer and uses the ChEMBL web service API to return relationships between molecule parents and salts (https://www.ebi.ac.uk/chembl/ws)
chembl_compound_target_predictions Function that accepts a ChEMBL molecule identifer and uses the ChEMBL web service API to return targets for which there is a predictied binding of a the molecular target (https://www.ebi.ac.uk/chembl/ws)
get_drug Function that returns various properties of antineoplastic drugs (targeted and non-targeted)
get_onco_drugs Function that returns various properties of antineoplastic drugs (targeted and non-targeted)
get_similar_compounds Function that accepts a SMILEs and queries PubChem for structurally similar compounds
pubchem_compound_properties Function that retrieves PubChem compound properties using PubChem public user gateway (PUG)
readUrl Function that retrieves PubChem compound properties using PubChem public user gateway (PUG)