public class SubstitutionMatrix
extends java.lang.Object
| Modifier and Type | Field and Description |
|---|---|
static byte[] |
BASES |
| Constructor and Description |
|---|
SubstitutionMatrix(byte[] matrix) |
SubstitutionMatrix(long[][] frequencies) |
| Modifier and Type | Method and Description |
|---|---|
byte |
base(byte refBase,
byte code) |
byte |
code(byte refBase,
byte readBase) |
byte[] |
getEncodedMatrix() |
java.lang.String |
toString() |