public class BamIndexValidator
extends java.lang.Object
| Modifier and Type | Class and Description |
|---|---|
static class |
BamIndexValidator.IndexValidationStringency |
| Constructor and Description |
|---|
BamIndexValidator() |
| Modifier and Type | Method and Description |
|---|---|
static int |
exhaustivelyTestIndex(SamReader reader) |
static int |
lessExhaustivelyTestIndex(SamReader reader)
A less time-consuming index validation that only looks at the first and last references in the index
and the first and last chunks in each of those
|
public static int exhaustivelyTestIndex(SamReader reader)
public static int lessExhaustivelyTestIndex(SamReader reader)
reader -