public class TabixUtils
extends java.lang.Object
| Modifier and Type | Class and Description |
|---|---|
static class |
TabixUtils.TIndex |
static class |
TabixUtils.TIntv |
static class |
TabixUtils.TPair64 |
| Modifier and Type | Field and Description |
|---|---|
static java.lang.String |
STANDARD_INDEX_EXTENSION |
| Constructor and Description |
|---|
TabixUtils() |
| Modifier and Type | Method and Description |
|---|---|
static SAMSequenceDictionary |
getSequenceDictionary(java.io.File tabixIndex)
Generates the SAMSequenceDictionary from the given tabix index file
|
static boolean |
less64(long u,
long v) |
public static final java.lang.String STANDARD_INDEX_EXTENSION
public static boolean less64(long u,
long v)
public static SAMSequenceDictionary getSequenceDictionary(java.io.File tabixIndex)
tabixIndex - the tabix index file