python-scripts/apisearch
python-scripts/foldtree
python-scripts/pyfoldtree
site-packages/foldtree-1.1.0rc2.dist-info/INSTALLER
site-packages/foldtree-1.1.0rc2.dist-info/METADATA
site-packages/foldtree-1.1.0rc2.dist-info/RECORD
site-packages/foldtree-1.1.0rc2.dist-info/REQUESTED
site-packages/foldtree-1.1.0rc2.dist-info/WHEEL
site-packages/foldtree-1.1.0rc2.dist-info/direct_url.json
site-packages/foldtree-1.1.0rc2.dist-info/entry_points.txt
site-packages/foldtree-1.1.0rc2.dist-info/licenses/LICENSE
site-packages/foldtree-1.1.0rc2.dist-info/top_level.txt
site-packages/foldtree/AFDB_tools.py
site-packages/foldtree/__init__.py
site-packages/foldtree/add_structalns.py
site-packages/foldtree/aggregate_res.py
site-packages/foldtree/aln2distmat.py
site-packages/foldtree/aln_treemerge.py
site-packages/foldtree/calcRF.py
site-packages/foldtree/calcfident_distributions.py
site-packages/foldtree/calcfident_foldtree_stats.py
site-packages/foldtree/calctreescores.py
site-packages/foldtree/clip_core.py
site-packages/foldtree/compile_treeset.py
site-packages/foldtree/concatenate_trees.py
site-packages/foldtree/corecut.py
site-packages/foldtree/create_iqtree_template.py
site-packages/foldtree/crossalns.py
site-packages/foldtree/dl_sequences.py
site-packages/foldtree/dl_sequences_ogs.py
site-packages/foldtree/dl_structs.py
site-packages/foldtree/foldseek2tree.py
site-packages/foldtree/foldseek_remote_search.py
site-packages/foldtree/foldseekres2distmat.py
site-packages/foldtree/foldseekres2distmat_simple.py
site-packages/foldtree/foldtree.py
site-packages/foldtree/getconsensustree.py
site-packages/foldtree/grabplddt.py
site-packages/foldtree/load_treesets.py
site-packages/foldtree/make_astral_input.py
site-packages/foldtree/postprocess.py
site-packages/foldtree/postprocess_3dcoffee.py
site-packages/foldtree/prepare_astral_pro.py
site-packages/foldtree/prepare_protsets_CATH.py
site-packages/foldtree/prepare_protsets_CATH_OMA.py
site-packages/foldtree/preprocess_3dcoffee.py
site-packages/foldtree/process_madroot.py
site-packages/foldtree/pyfoldtree.py
site-packages/foldtree/read_astral.py
site-packages/foldtree/retrieve_uniref90_homologs.py
site-packages/foldtree/simulate_frames.py
site-packages/foldtree/split_frames.py
site-packages/foldtree/structalns.py
site-packages/foldtree/structs2fasta.py
site-packages/foldtree/swaplabels.py
site-packages/foldtree/treemerge.py
site-packages/foldtree/treescore.py
site-packages/foldtree/workflow/Astral
site-packages/foldtree/workflow/FidentXaln
site-packages/foldtree/workflow/MDbootstrap
site-packages/foldtree/workflow/ML3ditree
site-packages/foldtree/workflow/astral_benchmark
site-packages/foldtree/workflow/benchmark_all
site-packages/foldtree/workflow/benchmarking
site-packages/foldtree/workflow/config/README.md
site-packages/foldtree/workflow/config/astral.yaml
site-packages/foldtree/workflow/config/config_vars.yaml
site-packages/foldtree/workflow/config/foldtree.yaml
site-packages/foldtree/workflow/envs/foldseek.yaml
site-packages/foldtree/workflow/envs/seqs.yaml
site-packages/foldtree/workflow/envs/trees.yaml
site-packages/foldtree/workflow/fold_tree
site-packages/foldtree/workflow/getstats
site-packages/foldtree/workflow/iqtreeXsingle
site-packages/foldtree/workflow/server_search
site-packages/foldtree/workflow/server_seqtree
site-packages/foldtree/workflow/tcoffee
