[console_scripts]
bed_to_gtf=flair.bed_to_gtf:main
bed_to_sequence=flair.bed_to_sequence:main
diff_iso_usage=flair.diff_iso_usage:main
diffsplice_fishers_exact=flair.diffsplice_fishers_exact:main
fasta_seq_lengths=flair.fasta_seq_lengths:main
flair=flair.flair_cli:main
flair_partition=flair.flair_partition:main
gtf_to_bed=flair.gtf_to_bed:main
identify_annotated_gene=flair.identify_annotated_gene:main
identify_gene_isoform=flair.identify_gene_isoform:main
junctions_from_sam=flair.junctions_from_sam:main
mark_intron_retention=flair.mark_intron_retention:main
mark_productivity=flair.mark_productivity:main
normalize_counts_matrix=flair.normalize_counts_matrix:main
plot_isoform_usage=flair.plot_isoform_usage:main
predictProductivity=flair.predictProductivity:main

