../../../bin/fastoma-batch-roothogs,sha256=K3MI2b3niN5K5Up7-DZLw7HAlBLYQOFkEGTNIQoyO3w,513
../../../bin/fastoma-check-input,sha256=1mpdrYGdmqFiSj_6o9SZ6NFVIRMavgXDa7weqIZ__rs,504
../../../bin/fastoma-collect-subhogs,sha256=v-sNUdyKqhKwd8I0XcSrn38gMqTQ1qy1OGoA_3xTdOo,516
../../../bin/fastoma-helper,sha256=k9KKA7wVWaY0BRnIGkJy7FZOLyZG8nQrxcf9yHaa-ts,477
../../../bin/fastoma-infer-roothogs,sha256=wcw5zVvqt7E0zKFbjRcBAmeesizWW-jq58N9mu2_p6c,513
../../../bin/fastoma-infer-subhogs,sha256=K6L5cqjy-AKhad5yYQHERCObfwC5oTS7Y08YMTIieUU,510
FastOMA/__init__.py,sha256=HIKXT8Q9GpTKlETNrhRMdpS-4U35b6PfV9ra6xK5cZM,105
FastOMA/__pycache__/__init__.cpython-312.pyc,,
FastOMA/__pycache__/_hog_class.cpython-312.pyc,,
FastOMA/__pycache__/_infer_subhog.cpython-312.pyc,,
FastOMA/__pycache__/_utils_frag_SO_detection.cpython-312.pyc,,
FastOMA/__pycache__/_utils_roothog.cpython-312.pyc,,
FastOMA/__pycache__/_utils_subhog.cpython-312.pyc,,
FastOMA/__pycache__/_wrappers.cpython-312.pyc,,
FastOMA/__pycache__/batch_roothogs.cpython-312.pyc,,
FastOMA/__pycache__/check_input.cpython-312.pyc,,
FastOMA/__pycache__/collect_subhogs.cpython-312.pyc,,
FastOMA/__pycache__/helper_scripts.cpython-312.pyc,,
FastOMA/__pycache__/infer_roothogs.cpython-312.pyc,,
FastOMA/__pycache__/infer_subhogs.cpython-312.pyc,,
FastOMA/__pycache__/logging_setup.cpython-312.pyc,,
FastOMA/__pycache__/transformer.cpython-312.pyc,,
FastOMA/_hog_class.py,sha256=XmYaZ8sHoJHcWwK3PgCGa5SWZy8OUP_4DPGONOcRdc8,21832
FastOMA/_infer_subhog.py,sha256=zscjF3bQGQXO1EHE1CukbHdPigeRAOe-NMCOWOLaIw8,40168
FastOMA/_utils_frag_SO_detection.py,sha256=ZmMGPKY69_g7toJ8PPmqmMQeZ-OPpx91f72NlxclI6c,24286
FastOMA/_utils_roothog.py,sha256=rI9gpFP0P7ysXHsZOO_RWFYiHzO7vFs4Wkp-1Xj--m4,46690
FastOMA/_utils_subhog.py,sha256=KonFgyMavliBYcFVWAAf3q3sBF2c5yXB_gzJgOYLvh0,27301
FastOMA/_wrappers.py,sha256=0odAivjFCB8tQrzfTLGfJ2tX_yzVYOw6WnUiNNzBqwE,7039
FastOMA/batch_roothogs.py,sha256=H2dJqeIghm8j-ridbXEmoJYheMQkcJTgqg-1vau-5N8,3110
FastOMA/check_input.py,sha256=XKnBRA8I8cUG7U9lONIIT9zTqv1aY0mo-OLPZObVe6U,13623
FastOMA/collect_subhogs.py,sha256=VRbDu6SydHR4p_uB1Zhv9WKChNJYOjOva9-8zf9R21g,14268
FastOMA/fastoma_notebook_stat.ipynb,sha256=5X2GAapSaJt_ddiHtLQGQ4z7HZyfV2bGDYsto5XlOdI,19035
FastOMA/helper_scripts.py,sha256=yXSxpTyq2_nPUe6iPKZmr89TlVp16AepwerHSx_rAJI,1250
FastOMA/infer_roothogs.py,sha256=SufEw3RYnZHD3U-TgldX6KVclrt0CfRBHQw_t9j9esg,5495
FastOMA/infer_subhogs.py,sha256=-H1xc0BvXLWuXszn4UXFP8Ax-ZxNRVdSiISRiLUWcYk,4849
FastOMA/logging_setup.py,sha256=l5kuaF-482uATiTIQo_wNUnIbMGaTOYSHvXEC5ojaAQ,1211
FastOMA/transformer.py,sha256=geupFCoP3W__PSj07wyLWwtCeFeL6KRv0Gl86sZzZBc,955
FastOMA/zoo/README.md,sha256=mcZ--gURPCDYrsRsxwH5DGUOBb9sd7SX-ODrX_rfIEg,86
FastOMA/zoo/__init__.py,sha256=8WU-em823gLYlvuNwaTdXWS_fMPzMn2Y5J8-hq1g8bU,22
FastOMA/zoo/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/__pycache__/unionfind.cpython-312.pyc,,
FastOMA/zoo/__pycache__/utils.cpython-312.pyc,,
FastOMA/zoo/familyanalyzer/__init__.py,sha256=mr-wzvbLV94M1Ao3qjHim9a7t9H3TfAG407O_bkw9_8,266
FastOMA/zoo/familyanalyzer/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/familyanalyzer/__pycache__/genetree.cpython-312.pyc,,
FastOMA/zoo/familyanalyzer/__pycache__/newick.cpython-312.pyc,,
FastOMA/zoo/familyanalyzer/__pycache__/orthoxmlquery.cpython-312.pyc,,
FastOMA/zoo/familyanalyzer/__pycache__/taxonomy.cpython-312.pyc,,
FastOMA/zoo/familyanalyzer/__pycache__/tools.cpython-312.pyc,,
FastOMA/zoo/familyanalyzer/genetree.py,sha256=epgj2pdhLFfOEk2bYlwKCJvvoO15cbxrtYwbOU-JiRU,10432
FastOMA/zoo/familyanalyzer/newick.py,sha256=mULzaSyN9OPdGPsX1ga8xPwT39yyO4QnVoyNmpHgWK0,8338
FastOMA/zoo/familyanalyzer/orthoxmlquery.py,sha256=ldn4bC8boa2sH3itFxTYuIGCGI21qoH__TflvcxIBVM,5166
FastOMA/zoo/familyanalyzer/taxonomy.py,sha256=UzfbntEwH5IFyS4Gob2KXVOMf2bNScazHYlXVZ_icd8,25844
FastOMA/zoo/familyanalyzer/tools.py,sha256=x1135LcSJ-kIOpoENyBndlTZlsBMySWgQ2pQoX_xdNw,2828
FastOMA/zoo/file_utils/__init__.py,sha256=adV4c3KACAh0_8saOjEQq57kYDU2FFOX5fv-pl7i2jc,59
FastOMA/zoo/file_utils/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/file_utils/__pycache__/context_managers.cpython-312.pyc,,
FastOMA/zoo/file_utils/__pycache__/extractors.cpython-312.pyc,,
FastOMA/zoo/file_utils/context_managers.py,sha256=Or6A_PluYQ7V9YqrhBL0js20ckbKgdsDeigZYFJzDH4,3251
FastOMA/zoo/file_utils/extractors.py,sha256=yr0PVm5WtoCFWFOiYdSglbtrazIBqw0ZcbjwH7z9uIs,2969
FastOMA/zoo/hog/__init__.py,sha256=fGwwklZMb2UfaijhMBQEuUHgToPxpR78O1L73JDb0-I,219
FastOMA/zoo/hog/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/hog/__pycache__/convert.cpython-312.pyc,,
FastOMA/zoo/hog/__pycache__/extract_groups.cpython-312.pyc,,
FastOMA/zoo/hog/__pycache__/extract_hog_info.cpython-312.pyc,,
FastOMA/zoo/hog/__pycache__/filter_orthoxml.cpython-312.pyc,,
FastOMA/zoo/hog/__pycache__/orthoxml_merge.cpython-312.pyc,,
FastOMA/zoo/hog/__pycache__/transform.cpython-312.pyc,,
FastOMA/zoo/hog/convert.py,sha256=L1P7vbqb4lHV1YI8YFEupi-4XKF7dHa-dUEqseo_KFI,5901
FastOMA/zoo/hog/extract_groups.py,sha256=Gbv-cTjgEsn8Jxh8NBlX6k3WxTJifBqv9VYeVlcXu9o,13645
FastOMA/zoo/hog/extract_hog_info.py,sha256=06cLhr19YlGtZWNLhidx0hDmr3baJob1PaiFNOzWWlY,4245
FastOMA/zoo/hog/filter_orthoxml.py,sha256=uT8PArgDPAj9OGgWJiF6Cqb7LV-m2WQBA7WWdsJycRM,2518
FastOMA/zoo/hog/orthoxml_merge.py,sha256=rmogLotaAAgjBvvtVzm8-_Fp9kAxI7st1QzGLGOhg40,5199
FastOMA/zoo/hog/transform.py,sha256=hFHkirSD0RVPqHoRIwtoYVlFy1WgNZS9fIUY18b7Jr0,6797
FastOMA/zoo/seq_utils/__init__.py,sha256=se0NfVXPzg1AIJbHQ9D3t-Lb9JNcEotVMRJ8FWrI634,23
FastOMA/zoo/seq_utils/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/seq_utils/__pycache__/utils.cpython-312.pyc,,
FastOMA/zoo/seq_utils/utils.py,sha256=Q-er9XAToCzs83uvgsSsbkCYGeg5pcMrRfENlDlRBCA,8807
FastOMA/zoo/unionfind.py,sha256=YHmQ2K9ggECOtYMHi4tnzWqJK0diu_YQ71fuyt_VuSg,4172
FastOMA/zoo/utils.py,sha256=zhTGGSOvAWzurNCtvYqPXj7Yu_MmdUXVMsfSe6lM2k0,3240
FastOMA/zoo/wrappers/__init__.py,sha256=TMhq4EaT3Evs0B3ZIylAZ7btX9e7C6xjdxjp4FEjXwU,42
FastOMA/zoo/wrappers/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/wrappers/__pycache__/abstract_cli.cpython-312.pyc,,
FastOMA/zoo/wrappers/__pycache__/options.cpython-312.pyc,,
FastOMA/zoo/wrappers/abstract_cli.py,sha256=QpnI9Zt85Tv5GidMFd0rDyTsAjqCi9c9Me2mxnE_PXU,10490
FastOMA/zoo/wrappers/aligners/__init__.py,sha256=lmTBSUto5SS8QXlwbZSmFWvfojz_3a4xCH2xtUhlxIg,186
FastOMA/zoo/wrappers/aligners/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/wrappers/aligners/__pycache__/base_aligner.cpython-312.pyc,,
FastOMA/zoo/wrappers/aligners/__pycache__/mafft.cpython-312.pyc,,
FastOMA/zoo/wrappers/aligners/__pycache__/muscle.cpython-312.pyc,,
FastOMA/zoo/wrappers/aligners/__pycache__/probcons.cpython-312.pyc,,
FastOMA/zoo/wrappers/aligners/__pycache__/prographmsa.cpython-312.pyc,,
FastOMA/zoo/wrappers/aligners/base_aligner.py,sha256=ldondQz_4cgD96v4xWLilueIJ4T6ZaQa8guIqD61Taw,3586
FastOMA/zoo/wrappers/aligners/mafft.py,sha256=-oa0ujZAfaYCrSwCoak_2aQ333-ufOIWDtd3nNaEscE,13368
FastOMA/zoo/wrappers/aligners/muscle.py,sha256=UrHR1qO3w_hByzse2RfYYp4zhbrFBGgnNIfNCxtmwtQ,4183
FastOMA/zoo/wrappers/aligners/probcons.py,sha256=-7IlGKUyWj7dLAG1Gmhy-slAGj7S-l72GAuT7CiXZIo,4927
FastOMA/zoo/wrappers/aligners/prographmsa.py,sha256=QqDz20VNZUnr49bixeR2v3CSjcEBHFDHI38-3OXUP30,4438
FastOMA/zoo/wrappers/modeltesters/__init__.py,sha256=wkk6tJuDTFMjiTTBST3iuZlVSpu5VoQl5dHmFjzaKpQ,33
FastOMA/zoo/wrappers/modeltesters/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/wrappers/modeltesters/__pycache__/base_modeltester.cpython-312.pyc,,
FastOMA/zoo/wrappers/modeltesters/__pycache__/parsers.cpython-312.pyc,,
FastOMA/zoo/wrappers/modeltesters/__pycache__/prottest.cpython-312.pyc,,
FastOMA/zoo/wrappers/modeltesters/base_modeltester.py,sha256=Xnyo5KbSj5RIvXPcGiqpDSjmC--PS5gd99VGd8ZNYlw,4483
FastOMA/zoo/wrappers/modeltesters/parsers.py,sha256=rAZbi236U1JmVnaW31w2nQlDQEkpm6U7uKB23gXmPFg,1300
FastOMA/zoo/wrappers/modeltesters/prottest.py,sha256=sLM5-M4kRm6SJkxQYD0FYdQQbZoH9WM0NMTSe4eHvWc,4237
FastOMA/zoo/wrappers/options.py,sha256=TKomiOcqthzCbyrDrbsCAt14Gg668wBOt9IqTNp_EJI,4782
FastOMA/zoo/wrappers/treebuilders/__init__.py,sha256=yCuDkuIBi40RXef8c7UBqF9yEobtzRDyWoJCOBCAU_0,139
FastOMA/zoo/wrappers/treebuilders/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/wrappers/treebuilders/__pycache__/base_treebuilder.cpython-312.pyc,,
FastOMA/zoo/wrappers/treebuilders/__pycache__/fasttree.cpython-312.pyc,,
FastOMA/zoo/wrappers/treebuilders/__pycache__/guenomu.cpython-312.pyc,,
FastOMA/zoo/wrappers/treebuilders/__pycache__/iqtree.cpython-312.pyc,,
FastOMA/zoo/wrappers/treebuilders/__pycache__/parsers.cpython-312.pyc,,
FastOMA/zoo/wrappers/treebuilders/__pycache__/phyml.cpython-312.pyc,,
FastOMA/zoo/wrappers/treebuilders/__pycache__/raxml.cpython-312.pyc,,
FastOMA/zoo/wrappers/treebuilders/base_treebuilder.py,sha256=F_EquUYii468x1XMwubUm9jxjQzVk2qyyCYKW3R9SnI,4511
FastOMA/zoo/wrappers/treebuilders/fasttree.py,sha256=FnstQT6S1y-SCRLx8JCRyHxeyyHScKLwh3XsAJJf0C8,5628
FastOMA/zoo/wrappers/treebuilders/guenomu.py,sha256=n244pxcrHKYPvG_GEACXZWIU0w_gvRsJPZY_RluVMi8,7227
FastOMA/zoo/wrappers/treebuilders/iqtree.py,sha256=spVqAO2oBl4lcBt61UBeIKrmA4lxwIDtJtmQjNG5QEQ,4449
FastOMA/zoo/wrappers/treebuilders/parsers.py,sha256=-YYUzkGqts1DoYOnrB4G_0h_VIwmOfVtN7fIO-exYTk,24385
FastOMA/zoo/wrappers/treebuilders/phyml.py,sha256=9NTY6Vw44rpVUflTJlW0CcVtqvlryBkoMpvBS3epPeA,4937
FastOMA/zoo/wrappers/treebuilders/raxml.py,sha256=qV-nqgKfTuif-d0nvQNUI4WvYc8WsMDtwW8Vnt0wNYE,5212
FastOMA/zoo/wrappers/trimmers/__init__.py,sha256=V6IFHJF6WQRFkDzhdYKFMRduJtdlaCp81OCQZaeetgc,28
FastOMA/zoo/wrappers/trimmers/__pycache__/__init__.cpython-312.pyc,,
FastOMA/zoo/wrappers/trimmers/__pycache__/base_trimmer.cpython-312.pyc,,
FastOMA/zoo/wrappers/trimmers/__pycache__/trimal.cpython-312.pyc,,
FastOMA/zoo/wrappers/trimmers/base_trimmer.py,sha256=SBWkILEHb-4euOdOtvFRBd84fpnzaWxVxxMsu4woQUk,2485
FastOMA/zoo/wrappers/trimmers/trimal.py,sha256=tyYdEkkXWHrDxMbzIarKGpykXpzcua1-Wugk-s9FVQQ,7064
fastoma-0.5.0.dist-info/INSTALLER,sha256=zuuue4knoyJ-UwPPXg8fezS7VCrXJQrAP7zeNuwvFQg,4
fastoma-0.5.0.dist-info/METADATA,sha256=ROooYq2tncVeoPVq80wXhtrKZFo9SrYRZhpRUK5Ijz4,28209
fastoma-0.5.0.dist-info/RECORD,,
fastoma-0.5.0.dist-info/REQUESTED,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
fastoma-0.5.0.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
fastoma-0.5.0.dist-info/direct_url.json,sha256=Zbe57AIEVn9IKVoVjN81dD6shpJPvSzXsfhguJyDF74,81
fastoma-0.5.0.dist-info/entry_points.txt,sha256=KriTWhV5Vw6smAurpv7JPSIjWvyTnzQ-5l80qvy-PgI,409
