| addExons | Add exons to rowRanges of a transcript-level SummarizedExperiment |
| addIds | Add IDs to rowRanges of a SummarizedExperiment |
| getTximetaBFC | Get or set the directory of the BiocFileCache used by tximeta |
| linkedTxome | Make and load linked transcriptomes ("linkedTxome") |
| loadLinkedTxome | Make and load linked transcriptomes ("linkedTxome") |
| makeLinkedTxome | Make and load linked transcriptomes ("linkedTxome") |
| setTximetaBFC | Get or set the directory of the BiocFileCache used by tximeta |
| summarizeToGene-method | Summarize estimated quantitites to gene-level |
| tximeta | tximeta: Transcript quantification import with automatic metadata |