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| LPSeset | ExpressionSet for Testing PLGEM |
| plgem.deg | Selection of Differentially Expressed Genes/Proteins With PLGEM |
| plgem.fit | PLGEM Fitting and Evaluation |
| plgem.obsStn | Computation of Observed PLGEM-STN Statistics |
| plgem.pValue | Computation of PLGEM p-values |
| plgem.resampledStn | Computation of Resampled PLGEM-STN Statistics |
| plgem.write.summary | Write the Result of a PLGEM Analysis to the Working Directory |
| run.plgem | Wrapper for Power Law Global Error Model (PLGEM) analysis method |
| setGpar | Set graphical parameters for PLGEM fitting evaluation plots |