| ideal-pkg-package | ideal: Interactive Differential Expression Analysis | 
| deseqresult2DEgenes | Generate a tidy table with the DE genes from the results of DESeq | 
| deseqresult2tbl | Generate a tidy table with the results of DESeq | 
| ggplotCounts | Plot normalized counts for a gene | 
| goseqTable | Extract functional terms enriched in the DE genes, based on goseq | 
| ideal | ideal: Interactive Differential Expression Analysis | 
| ideal-pkg | ideal: Interactive Differential Expression Analysis | 
| plot_ma | MA-plot from base means and log fold changes | 
| plot_volcano | Volcano plot for log fold changes and log p-values | 
| read_gmt | Read in a GMT file | 
| sepguesser | Make an educated guess on the separator character | 
| sig_heatmap | Plot a heatmap of the gene signature on the data | 
| wrapup_for_iSEE | wrapup_for_iSEE |