bin/BINge
bin/BINge.py
bin/BINge_post
bin/BINge_post.py
bin/_version.py
bin/modules/annotation.py
bin/modules/bin_handling.py
bin/modules/bins.py
bin/modules/cdhit.py
bin/modules/clustering.py
bin/modules/fasta_handling.py
bin/modules/gff3.py
bin/modules/gff3fasta.py
bin/modules/gff3tofasta.py
bin/modules/gmap_handling.py
bin/modules/go.py
bin/modules/locations.py
bin/modules/mmseqs.py
bin/modules/parsing.py
bin/modules/salmon.py
bin/modules/thread_workers.py
bin/modules/validation.py
bin/tests/data/annotation_chimer.gff3
bin/tests/data/annotation_fragments.gff3
bin/tests/data/clustering_result_1.tsv
bin/tests/data/empty_file
bin/tests/data/genome1.fasta
bin/tests/data/genome1.gff3
bin/tests/data/gmap.gff3
bin/tests/data/gmap_bad.gff3
bin/tests/data/gmap_chimer.gff3
bin/tests/data/gmap_cmj.gff3
bin/tests/data/gmap_cmj_cross.gff3
bin/tests/data/gmap_fh.gff3
bin/tests/data/gmap_fh_cross.gff3
bin/tests/data/gmap_fragments.gff3
bin/tests/data/gmap_normal.gff3
bin/tests/data/length_index.pkl
bin/tests/evaluate_vertebrates_clustering.py
bin/tests/test_units.py
bin/utilities/cdhit_parameter_pipeline.py
bin/utilities/evaluate_clustering.py
