python-scripts/acinetoscope
site-packages/acinetoscope-1.2.0.dist-info/INSTALLER
site-packages/acinetoscope-1.2.0.dist-info/METADATA
site-packages/acinetoscope-1.2.0.dist-info/RECORD
site-packages/acinetoscope-1.2.0.dist-info/REQUESTED
site-packages/acinetoscope-1.2.0.dist-info/WHEEL
site-packages/acinetoscope-1.2.0.dist-info/direct_url.json
site-packages/acinetoscope-1.2.0.dist-info/entry_points.txt
site-packages/acinetoscope-1.2.0.dist-info/licenses/LICENSE
site-packages/acinetoscope-1.2.0.dist-info/top_level.txt
site-packages/acinetoscope/acinetoscope.py
site-packages/acinetoscope/modules/abricate_module/acineto_abricate.py
site-packages/acinetoscope/modules/amr_module/.gitignore
site-packages/acinetoscope/modules/amr_module/acineto_amrfinder.py
site-packages/acinetoscope/modules/amr_module/bin/amr_report
site-packages/acinetoscope/modules/amr_module/bin/amrfinder
site-packages/acinetoscope/modules/amr_module/bin/amrfinder_index
site-packages/acinetoscope/modules/amr_module/bin/amrfinder_update
site-packages/acinetoscope/modules/amr_module/bin/disruption2genesymbol
site-packages/acinetoscope/modules/amr_module/bin/dna_mutation
site-packages/acinetoscope/modules/amr_module/bin/fasta2parts
site-packages/acinetoscope/modules/amr_module/bin/fasta_check
site-packages/acinetoscope/modules/amr_module/bin/fasta_extract
site-packages/acinetoscope/modules/amr_module/bin/gff_check
site-packages/acinetoscope/modules/amr_module/bin/mutate
site-packages/acinetoscope/modules/amr_module/bin/stx/fasta_check
site-packages/acinetoscope/modules/amr_module/bin/stx/fasta_extract
site-packages/acinetoscope/modules/amr_module/bin/stx/stx.prot
site-packages/acinetoscope/modules/amr_module/bin/stx/stxtyper
site-packages/acinetoscope/modules/amr_module/bin/stx/test/amrfinder_integration.expected
site-packages/acinetoscope/modules/amr_module/bin/stx/test/amrfinder_integration2.expected
site-packages/acinetoscope/modules/amr_module/bin/stx/test/basic.expected
site-packages/acinetoscope/modules/amr_module/bin/stx/test/basic.nuc_out.expected
site-packages/acinetoscope/modules/amr_module/bin/stx/test/cases.expected
site-packages/acinetoscope/modules/amr_module/bin/stx/test/synthetics.expected
site-packages/acinetoscope/modules/amr_module/bin/stx/test/virulence_ecoli.expected
site-packages/acinetoscope/modules/amr_module/bin/stx/test_stxtyper.sh
site-packages/acinetoscope/modules/amr_module/bin/stx/version.txt
site-packages/acinetoscope/modules/amr_module/bin/stxtyper
site-packages/acinetoscope/modules/amr_module/bin/test_amrfinder.sh
site-packages/acinetoscope/modules/amr_module/bin/test_both.expected
site-packages/acinetoscope/modules/amr_module/bin/test_disrupt.expected
site-packages/acinetoscope/modules/amr_module/bin/test_dna.expected
site-packages/acinetoscope/modules/amr_module/bin/test_dna.fa
site-packages/acinetoscope/modules/amr_module/bin/test_dna_mut_all.expected
site-packages/acinetoscope/modules/amr_module/bin/test_prot.expected
site-packages/acinetoscope/modules/amr_module/bin/test_prot.fa
site-packages/acinetoscope/modules/amr_module/bin/test_prot.gff
site-packages/acinetoscope/modules/amr_module/bin/test_prot.gz.fa
site-packages/acinetoscope/modules/amr_module/bin/version.txt
site-packages/acinetoscope/modules/amr_module/stx/fasta_check
site-packages/acinetoscope/modules/amr_module/stx/fasta_extract
site-packages/acinetoscope/modules/amr_module/stx/stx.prot
site-packages/acinetoscope/modules/amr_module/stx/stxtyper
site-packages/acinetoscope/modules/amr_module/stx/test/amrfinder_integration.expected
site-packages/acinetoscope/modules/amr_module/stx/test/amrfinder_integration.fa
site-packages/acinetoscope/modules/amr_module/stx/test/amrfinder_integration2.expected
site-packages/acinetoscope/modules/amr_module/stx/test/amrfinder_integration2.fa
site-packages/acinetoscope/modules/amr_module/stx/test/basic.expected
site-packages/acinetoscope/modules/amr_module/stx/test/basic.fa
site-packages/acinetoscope/modules/amr_module/stx/test/basic.nuc_out.expected
site-packages/acinetoscope/modules/amr_module/stx/test/cases.expected
site-packages/acinetoscope/modules/amr_module/stx/test/cases.fa
site-packages/acinetoscope/modules/amr_module/stx/test/synthetics.expected
site-packages/acinetoscope/modules/amr_module/stx/test/synthetics.fa
site-packages/acinetoscope/modules/amr_module/stx/test/virulence_ecoli.expected
site-packages/acinetoscope/modules/amr_module/stx/test/virulence_ecoli.fa
site-packages/acinetoscope/modules/amr_module/stx/test_stxtyper.sh
site-packages/acinetoscope/modules/amr_module/stx/version.txt
site-packages/acinetoscope/modules/k_o_module/acineto_kaptive.py
site-packages/acinetoscope/modules/mlst_module/bin/mlst
site-packages/acinetoscope/modules/mlst_module/database.sh
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.ndb
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.nhd
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.nhi
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.nhr
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.nin
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.njs
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.nog
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.nos
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.not
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.nsq
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.ntf
site-packages/acinetoscope/modules/mlst_module/db/blast/mlst.fa.nto
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii/Oxf_cpn60.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii/Oxf_gdhB.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii/Oxf_gltA.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii/Oxf_gpi.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii/Oxf_gyrB.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii/Oxf_recA.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii/Oxf_rpoD.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii/abaumannii.txt
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii/database_version.txt
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii_2/Pas_cpn60.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii_2/Pas_fusA.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii_2/Pas_gltA.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii_2/Pas_pyrG.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii_2/Pas_recA.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii_2/Pas_rplB.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii_2/Pas_rpoB.tfa
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii_2/abaumannii_2.txt
site-packages/acinetoscope/modules/mlst_module/db/pubmlst/abaumannii_2/database_version.txt
site-packages/acinetoscope/modules/mlst_module/db/scheme_species_map.tab
site-packages/acinetoscope/modules/mlst_module/mlst_module.py
site-packages/acinetoscope/modules/mlst_module/perl5/MLST/Logger.pm
site-packages/acinetoscope/modules/mlst_module/perl5/MLST/PubMLST.pm
site-packages/acinetoscope/modules/mlst_module/perl5/MLST/Requirements.pm
site-packages/acinetoscope/modules/mlst_module/perl5/MLST/Scheme.pm
site-packages/acinetoscope/modules/mlst_module/perl5/Path/Tiny.pm
site-packages/acinetoscope/modules/mlst_module/scripts/mlst-make_blast_db
site-packages/acinetoscope/modules/mlst_module/scripts/mlst-show_seqs
site-packages/acinetoscope/modules/plasmid_typing_module/data/apt_reps_v3.fasta
site-packages/acinetoscope/modules/plasmid_typing_module/database.sh
site-packages/acinetoscope/modules/plasmid_typing_module/plasmid_typer.py
site-packages/acinetoscope/modules/qc_module/acineto_fasta_qc.py
site-packages/acinetoscope/modules/summary_module/genius_acinetobacter_reporter.py
