PeptideShaker can be used to process the search results 
            from multiple search engines and combine the identifications into a single result. For details on PeptideShaker 
            please the the PeptideShaker home page.
            
            In order to use PeptideShaker from SearchGUI 
            you first have to download and unzip PeptideShaker. When this is done all you have to do is to click the 
            Edit button next to the PeptideShaker location field in this dialog 
            and locate the PeptideShaker jar file. You 
            only have to do this the first time you want to use PeptideShaker.
            
            Next you provide some information about the project: project name, sample name and replicate number. These are 
            used for referring to the project at later stages of the analysis.
            
            Finally you select the output file where you want the PeptideShaker results to be saved. Note that the results 
            will be automatically opened in PeptideShaker when the processing has completed.
            
            You also have the opportunity of linking the SearchGUI results with Mascot results. Note that the Mascot results 
            have to be compatible with the SearchGUI results, i.e., the Mascot searches have to be run the exact same spectrum 
            files and database, and with the same search settings. For details on how to carry out the Mascot searches see 
            Mascot Support and 
            Database Help.
            
            It is also possible to tailor the processing parameters and the import filters at this stage.