Fixed BUSCO offline usage (thanks to @Lucy-Quirk).
Fixed prokaryotic annotation analysis (thanks to Nikoletta Nagy).
Fixed exit code (thanks to Matthias Bernt).
Removed deprecated matplotlib arguments (thanks to sjaenick).
Fixed BUSCO reports.
Fixed BLAT launch.
Switched to BUSCO v4.
DEPRECATED: --tophat option is deprecated and removed.
NEW: Python3 support.
NEW: user manual in markdown format.
FIX: ValueError: list.remove(x): x not in list
error.
FIX: GFF3 support.
FIX: ValueError: Axis limits cannot be NaN or Inf
error.