bin/cawlign
share/cawlign/genetic_codes/alt-yeast-nuclear
share/cawlign/genetic_codes/ascidian-mtdna
share/cawlign/genetic_codes/blepharisma-nuclear
share/cawlign/genetic_codes/cephalodiscidae-mtdna
share/cawlign/genetic_codes/chlorophycean-mtdna
share/cawlign/genetic_codes/ciliate-nuclear
share/cawlign/genetic_codes/echinoderm-mtdna
share/cawlign/genetic_codes/euplotid-nuclear
share/cawlign/genetic_codes/flatworm-mtdna
share/cawlign/genetic_codes/invertebrate-mtdna
share/cawlign/genetic_codes/mesodinium-nuclear
share/cawlign/genetic_codes/mold-protozoan-mtdna
share/cawlign/genetic_codes/ncbi-codon-map
share/cawlign/genetic_codes/pachysolen-nuclear
share/cawlign/genetic_codes/peritrich-nuclear
share/cawlign/genetic_codes/pterobranchia-mtdna
share/cawlign/genetic_codes/scenedesmus-obliquus-mtdna
share/cawlign/genetic_codes/sr1-and-gracilibacteria
share/cawlign/genetic_codes/thraustochytrium-mtdna
share/cawlign/genetic_codes/trematode-mtdna
share/cawlign/genetic_codes/universal
share/cawlign/genetic_codes/vertebrate-mtdna
share/cawlign/genetic_codes/yeast-mtdna
share/cawlign/references/COXI-mouse
share/cawlign/references/CoV2-E
share/cawlign/references/CoV2-M
share/cawlign/references/CoV2-N
share/cawlign/references/CoV2-ORF10
share/cawlign/references/CoV2-ORF1a
share/cawlign/references/CoV2-ORF1b
share/cawlign/references/CoV2-ORF3a
share/cawlign/references/CoV2-ORF5
share/cawlign/references/CoV2-ORF6
share/cawlign/references/CoV2-ORF7a
share/cawlign/references/CoV2-ORF7b
share/cawlign/references/CoV2-ORF8
share/cawlign/references/CoV2-RdRp
share/cawlign/references/CoV2-S
share/cawlign/references/CoV2-endornase
share/cawlign/references/CoV2-exonuclease
share/cawlign/references/CoV2-helicase
share/cawlign/references/CoV2-leader
share/cawlign/references/CoV2-methyltransferase
share/cawlign/references/CoV2-nsp10
share/cawlign/references/CoV2-nsp2
share/cawlign/references/CoV2-nsp3
share/cawlign/references/CoV2-nsp4
share/cawlign/references/CoV2-nsp6
share/cawlign/references/CoV2-nsp7
share/cawlign/references/CoV2-nsp8
share/cawlign/references/CoV2-nsp9
share/cawlign/references/CoV2-threeC
share/cawlign/references/HXB2_gag
share/cawlign/references/HXB2_int
share/cawlign/references/HXB2_nef
share/cawlign/references/HXB2_pol
share/cawlign/references/HXB2_pr
share/cawlign/references/HXB2_prrt
share/cawlign/references/HXB2_rev
share/cawlign/references/HXB2_rt
share/cawlign/references/HXB2_tat
share/cawlign/references/HXB2_vif
share/cawlign/scoring/BLOSUM62
share/cawlign/scoring/HIV_BETWEEN_F
share/cawlign/scoring/NUC4.4
